Insertion junction: CLIP2.001492_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001492
Chromosome:chromosome 6
Location:3719178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278159 CRCO,CO,CON1,CONSTANS CONSTANS-like protein involved in circadian rhythms; (1 of 1) PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCTGCGGTGCTGTCGCCCTCGGGCAGCGAGGCCGTGGTGCCCGTCAT
Internal bar code:GGACTCTCCGTATCGCTCCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:5976
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCCCGGGTTCATCGTAC
Suggested primer 2:TCGCCTCAAAGGTTCAGTCC