Insertion junction: CLIP2.001503_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001503
Chromosome:chromosome 3
Location:5197939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181500 DPE1,STA11 Disproportionating enzyme 1; (1 of 1) PTHR32438:SF5 - 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGGCGGTTCGTGTCGTGTGCCACCTTCCGCAGGTCCTCGCCCTCCTT
Internal bar code:GTCTCGGTTTGTGTTGGTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3384
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTATGGCTGTCGTCTAGC
Suggested primer 2:ACTGAACGCCTCTGCATGAA