Insertion junction: CLIP2.001507_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001507
Chromosome:chromosome 14
Location:3561208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630847 TAL2 Putative transaldolase, plastid form; (1 of 1) PTHR10683//PTHR10683:SF10 - TRANSALDOLASE // TRANSALDOLASE-LIKE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACCGCCCCCGCCCGCGATTGCCGGCCACACCCTCCACTAAACAATCT
Internal bar code:CTGGCATAACTGACGTGGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:313
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCGCCTGGCTCCTACAC
Suggested primer 2:CCCCAACGTGAGAGAGACAC