Insertion junction: CLIP2.001510_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001510
Chromosome:chromosome 9
Location:5344104
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g407750 CGL130 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAACACGGAGGTGGAGGGGTTGCGGTCAGAGTTCATGGAGCTGAAGACG
Internal bar code:GGTCTGATAATGAGATCAAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2479
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGTCCACGACCCTGTAA
Suggested primer 2:CACTGCTCTGCTCAAGCTCT