Insertion junction: CLIP2.001511_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001511
Chromosome:chromosome 10
Location:1428867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427950 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACTGTGAGGTAGTCCCGCATGGAGCCCGCTGAAAAAGAGCCCAGAG
Internal bar code:GGGCAGGGGCAGCGAGGCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:409
LEAP-Seq percent confirming:9.375
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTTCTGCAATGGCGATG
Suggested primer 2:CTATCAGCTGCTCCCAGTCG