Insertion junction: CLIP2.001515_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001515
Chromosome:chromosome 3
Location:5992429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189500 (1 of 3) K03574 - 8-oxo-dGTP diphosphatase [EC:3.6.1.55] (mutT, NUDT15, MTH2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGCATGTGCCATGGTGCTGCGCGCCGTCGCGGCTCCTCGTTGCCACC
Internal bar code:CGTAGCGTCGATATGCAAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1935
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCGCTAACCAGTTTCCTC
Suggested primer 2:ACCCAAGATGCCGTAATGCA