Insertion junction: CLIP2.001522_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001522
Chromosome:chromosome 6
Location:100364
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g249650 CGL55 conserved protein related to cleavage and polyadenylation factor 6; (1 of 1) PF03031//PF12738 - NLI interacting factor-like phosphatase (NIF) // twin BRCT domain (PTCB-BRCT) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCGTTGTGCTGTCGGTGCAGGCTGCGCTGACGGTGGCGCCGCACGCC
Internal bar code:TTCTCCTTCCCCCTCCAACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:527
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACTGCTCATATGGCCAA
Suggested primer 2:CTTTGCACTCTGGCCTCTCA