Insertion junction: CLIP2.001527_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001527
Chromosome:chromosome 6
Location:3478738
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g278109 FAD2B Putative Oleate/fatty acid desaturase, _-12; (1 of 1) 1.14.15.3 - Alkane 1-monooxygenase / Omega-hydroxylase 3'UTR
Cre06.g278110 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTCGGGTGCGACATGCCCCATTCCCCCCATGGTGTAAGGCCATCCGC
Internal bar code:GGTCTGAAATATGATGCCGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:727
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCATCTCCAGCCATTGTT
Suggested primer 2:TGGAGCCTCCTAAGTTTGCG