Insertion junction: CLIP2.001532_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001532
Chromosome:chromosome 6
Location:3719029
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278159 CRCO,CO,CON1,CONSTANS CONSTANS-like protein involved in circadian rhythms; (1 of 1) PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGATGACGCCACCATCGTCAGCTTCTTTTTTCGCACCTGCTCGACTGA
Internal bar code:AATCAGAAAAGGGGGCACAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2654
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGATGGCGTGGATATGTG
Suggested primer 2:CATGCGTAAGGGAATGCAGC