Insertion junction: CLIP2.001534_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001534
Chromosome:chromosome 6
Location:4752447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279500 CPL6 Conserved in the Plant Lineage; (1 of 1) PTHR15852:SF8 - CHAPERONE PROTEIN DNAJ-LIKE PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTTCAATCTGAACTCCTGAGGCCACCGCACTTGCCTAGGGCCCCACC
Internal bar code:GTCTGGATGCATTAATCTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5267
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAAGAACAGGTGAGGCT
Suggested primer 2:AATAAAGACGGCGCACCTGA