Insertion junction: CLIP2.001563_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001563
Chromosome:chromosome 17
Location:3686272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725750 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGCAGCATCGAGCCAGGCGGCGAAGGCAGCTGCATCGACTGCGCCCGA
Internal bar code:TGCCATTTCGGGCAATCAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1924
LEAP-Seq percent confirming:97.4684
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGAGCAACTGGGAAGAT
Suggested primer 2:TGGGTAAGGAAGGCGAACAC