Insertion junction: CLIP2.001569_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001569
Chromosome:chromosome 16
Location:4535404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671500 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCGGTGCGGCATGCCGTGTGTGCTGAGGTGTCACCGTGTGGTTCGCC
Internal bar code:CGGAAGTCACTTTCACGGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1660
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGCCACTGAGTCCCTGA
Suggested primer 2:TGTCGAGAGGTGTTGCACTC