Insertion junction: CLIP2.001571_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001571
Chromosome:chromosome 13
Location:1700490
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g574200 PAP2 (1 of 3) K03514 - non-canonical poly(A) RNA polymerase PAPD5/7 (PAPD5_7, TRF4); Class-II RNA nucleotidyl transferase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTGGAGATGATGGAGGCTGGATGGGCGGTTCGTCTGAGTGGCTGTGA
Internal bar code:AGGTTCGTACCAGCCGTGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:445
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGTGATCCTCCTGCAA
Suggested primer 2:GAGCGAGAATGAAAGCAGCG