Insertion junction: CLIP2.001572_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001572
Chromosome:chromosome 6
Location:8307960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307150 AMB1,AMYB1 Beta-amylase 1; (1 of 3) 3.2.1.2 - Beta-amylase / Saccharogen amylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTTTGCACAGGCGCTTGTTGCCCTCAAAAAAATCCGTGTACTGCAGG
Internal bar code:GTTTTTTGATGTTTAGACGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4662
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:226
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:226

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCTCCTTCCCCACATGC
Suggested primer 2:GGGAACGCACAAGAAACGAC