Insertion junction: CLIP2.001573_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001573
Chromosome:chromosome 12
Location:7225020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g559000 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCACACGGAAAGTCACTCACCGGAAGCCGCAGACTCCGCGCGGCCTGA
Internal bar code:TGAGGATTTAGGCGGCGGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3319
LEAP-Seq percent confirming:99.1736
LEAP-Seq n confirming:120
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCTGGTGAGTTGGTTGG
Suggested primer 2:ATGGAAACGAGGGCGGATTT