Insertion junction: CLIP2.001575_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001575
Chromosome:chromosome 3
Location:2556682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159851 (1 of 2) IPR001623//IPR002110//IPR020683 - DnaJ domain // Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGCCGGCCTGCGCCGCGAGAGGGCGGGGTGGGGTGACAGCAAGGTG
Internal bar code:GGAATCGTTTGGATGTGAAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:4715
LEAP-Seq percent confirming:94.3662
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATGCAGTGATGACATG
Suggested primer 2:TTGTCGGGATGCCTGTGTAC