Insertion junction: CLIP2.001579_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001579
Chromosome:chromosome 2
Location:3595704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099601 (1 of 4) PF01342 - SAND domain (SAND) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAAACCCTCCGCCCGTCCCGCCTCCCTTCGACTGCCCTCCGTATGCA
Internal bar code:GCTTTGGTAAATATTATTGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2001
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTCATCACCCGGCAACAT
Suggested primer 2:GTCCCAAGGGGTATGTGGTG