Insertion junction: CLIP2.001580_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001580
Chromosome:chromosome 1
Location:2594768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015350 POR1,POR Light-dependent protochlorophyllide reductase; (1 of 1) K00218 - protochlorophyllide reductase (E1.3.1.33, por) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGATGACCTGGGGTCGGGTTGGGGAGCAAGGCAGAGAGGAGGTAGCTT
Internal bar code:CTTCACCGAAGTAAAGGTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3355
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGACCACGTGCACTTGG
Suggested primer 2:GGCCCCGTATATGCAGTCTC