Insertion junction: CLIP2.001584_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001584
Chromosome:chromosome 1
Location:6895716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049350 (1 of 1) PTHR31412//PTHR31412:SF5 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAACGCAACTGCGTCAAGTCACGGGCACTGGGAGAGCATGCACACGGG
Internal bar code:GTTGGTCTTGAATTCCAACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:151
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCTCGCATTCTTCTTCG
Suggested primer 2:CGTCCAGAACACGGGTTACA