Insertion junction: CLIP2.001585_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001585
Chromosome:chromosome 7
Location:4613821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344350 TPP1 Chloroplast thylakoid processing peptidase; (1 of 1) K03100 - signal peptidase I (lepB) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTCTTCTGTCTGGAGCACATAGCAACGCTAAGCAAGCACGAAGGCGT
Internal bar code:GTGGTGATACATGTAATAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1740
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCCAAGGGCTAGTAGCA
Suggested primer 2:CAATGGTGAGCAGGTCGTCT