Insertion junction: CLIP2.001586_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001586
Chromosome:chromosome 7
Location:4657018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344771 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCTTGCACAGGACCGCCGCGGTCTGCGACACGCTGGTCCAGTCCCCA
Internal bar code:ACTAGAACTCACCTTCCGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1678
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACTCGTCGTCCATCAAA
Suggested primer 2:CGAGCCCGTACCATACTTCC