Insertion junction: CLIP2.001587_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001587
Chromosome:chromosome 1
Location:4279384
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028900 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAAAACCGCACGGATGTTGGACAATCCACCGCACACACGCTGCTGTC
Internal bar code:ATATTTTCAAGGTCGTAGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2969
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCACTTTTCGCCGTACT
Suggested primer 2:GGATCCCACGGTATCTGCAG