Insertion junction: CLIP2.001589_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001589
Chromosome:chromosome 3
Location:4041974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171900 FAP56 Flagellar Associated Protein 56 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCGGCGCTGGCGGAGCCAAGAAGCCCAACGCCGACGCTCCGCGTCCC
Internal bar code:CACGAAGGCGTTCCGGACCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1112
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGGTGCGTGCTGGGTAAG
Suggested primer 2:TGCTGTGTGCCCGTAATCTT