Insertion junction: CLIP2.001595_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001595
Chromosome:chromosome 12
Location:3570488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAGGGCTGCGGCGGTGGCGGCGGTGCGGCGGTTGAGCCGGCACGAGG
Internal bar code:CAAATTACTGTAGACGACGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:494
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACAAGCAGGATGGAGCC
Suggested primer 2:AGCACAACAGAAGGAGTCCG