Insertion junction: CLIP2.001598_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001598
Chromosome:chromosome 17
Location:4084472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728850 RAA15 component psaA trans-splicing sub complex II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCATCCGACCAGGAGATGGGCAGTTGGGCGTCTACCGCACCCATGGCA
Internal bar code:GTTTGTTTTAGCAGTCCAATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2861
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGCATGGAGACTGCGAA
Suggested primer 2:CGCAAGTTCTGGGACCTCAT