Insertion junction: CLIP2.001602_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001602
Chromosome:chromosome 7
Location:5450011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350900 (1 of 6) PF12796//PF13920 - Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTTTTCAGTGGGCATGGTCGTCTGGTGTGTCCTACCATGCGCATGGGC
Internal bar code:AATTTGGCAGCGAGTTGTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1110
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGATTCAGGTTTCCGGG
Suggested primer 2:GTTGTCTGTTGGCTGCTGTG