Insertion junction: CLIP2.001608_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001608
Chromosome:chromosome 17
Location:3824020
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g727250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGTCGTCTCCGCTGGCGGTGCTTGAGTGGGTAGCTGAGCCACTGGAC
Internal bar code:GGATCGGACGATCTTGCTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:336
LEAP-Seq percent confirming:1.23457
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:80
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCGACTCGGTTTCGACGT
Suggested primer 2:TGCAGGATTGGGCAAGCATA