Insertion junction: CLIP2.001612_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001612
Chromosome:chromosome 3
Location:1959031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155400 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAATGCGGTGCCTGAAGCAGACCCTTGTTAAGTAATGGTTTGCACGA
Internal bar code:CAGAGAGCTCGGACATGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2307
LEAP-Seq percent confirming:91.4894
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCTTCAGGGCTAGACAA
Suggested primer 2:AGTCACCCAGTATCCGCTCT