Insertion junction: CLIP2.001631_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001631
Chromosome:chromosome 5
Location:378345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243550 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTGTCCTTTCTTTCGGTCCTCCCCGACTAGTGCGCCGGGACCGTCCC
Internal bar code:TATTATGCGATGAATAGTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5855
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCAATGCTACCCACGAA
Suggested primer 2:CCATTCAAGGTGCGCTATGC