Insertion junction: CLIP2.001634_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001634
Chromosome:chromosome 10
Location:2887901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439700 CGL28 conserved expressed putative RNA binding protein; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACGCATTGCCTCTGTTGCAGGCATGATTGCGCCTGGGATGATGGCTCC
Internal bar code:AGGGAATCCGGCCCATTTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1357
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCCCCATATGCTGTTGTT
Suggested primer 2:ATGAGCAAGGTGTGTCGGAG