Insertion junction: CLIP2.001656_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001656
Chromosome:chromosome 12
Location:656487
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g493300 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGCGTGTGTGTGTGCGTGTGTGTGTGTATACGGTATTATGTGTATGT
Internal bar code:GGCCACCCGTCCTCTTGCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:480
LEAP-Seq percent confirming:70.8333
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGCGAACAAGTTTGTCT
Suggested primer 2:AAGGGAAGGGGCTTGGATTG