Insertion junction: CLIP2.001660_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001660
Chromosome:chromosome 1
Location:7398206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g052100 PRPL18 (1 of 1) K02881 - large subunit ribosomal protein L18 (RP-L18, MRPL18, rplR); Chloroplast ribosomal protein L18 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGTGATGATGCCCGCTGCGTTTTCTTGCCTATGAACCACCCGCCAGCC
Internal bar code:GCGGGGGGATAAGCAGGTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5015
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:125
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:125

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTTCGGTCTTGGTCCTC
Suggested primer 2:TCTTGCGGAAGTACTACGGC