Insertion junction: CLIP2.001661_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001661
Chromosome:chromosome 3
Location:175509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144064 (1 of 24) IPR001478 - PDZ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCTGTGACACGAGTGCGCTACGGCGCCATGGTGTTGCGCGGTGTCC
Internal bar code:GTCGTCAGGCTTGATAGGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1335
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGCGTTGTGTGACCTCC
Suggested primer 2:AGTCCGACTCCGAGGTGTAA