Insertion junction: CLIP2.001662_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001662
Chromosome:chromosome 10
Location:5616608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458550 STIC2 Chloroplast protein biogenesis factor; (1 of 1) PTHR33449:SF1 - NUCLEOID-ASSOCIATED PROTEIN YBAB CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAACCCTGGCGCCCTGAACATGTAAAGCGCGTTCCATCAGACAGACA
Internal bar code:ATCGTTTGATTAGGTAAGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1429
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAACACCTCCGGCCTTTG
Suggested primer 2:AAGGGCCAAGGGAGCAATAC