Insertion junction: CLIP2.001667_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001667
Chromosome:chromosome 2
Location:5228228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112300 MOT15,CAL3 Calpain family cysteine protease; (1 of 2) K08582 - calpain-15 [EC:3.4.22.-] (CAPN15) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATACGGCGTGATGGTTACACACGGCATGCCCTGTGACGGTGTGTCAGC
Internal bar code:GCACATCCTCGTCCAATTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:392
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCACATACAGCCTGCTTCCA
Suggested primer 2:CAAGCATCACTATTGCGGCC