Insertion junction: CLIP2.001677_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001677
Chromosome:chromosome 13
Location:2940039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583600 DGD1 Digalactosyldiacylglycerol synthase; (1 of 1) 2.4.1.241 - Digalactosyldiacylglycerol synthase / UDP-galactose:MGDG galactosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCACAACCCGCCGCGACGCGCACCTGTAGATGAGGCAGTTGGGGAA
Internal bar code:AGAAGGTCTCTAACCTCCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:65
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCATTGAAGCTGCATCG
Suggested primer 2:TACTCCCTCACCCTGCTCTC