Insertion junction: CLIP2.001678_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001678
Chromosome:chromosome 6
Location:1609310
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261500 CPLD58 Conserved in the Plant Lineage and Diatoms; (1 of 1) PTHR11260:SF136 - THIOREDOXIN FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCATACACACTCGTGCTCTTTAACATAGTTCCAGCAGCCATAGACATG
Internal bar code:TCTTGTTATGGTTAGCTCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2644
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACGCGTTAATTGATCGT
Suggested primer 2:GATGATGTCGTCGCTCTCGT