Insertion junction: CLIP2.001683_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001683
Chromosome:chromosome 3
Location:4203164
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173600 (1 of 11) IPR000626//IPR029071 - Ubiquitin domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCAGCCTCGACAGGCTCACAGCGTTGCGACGGGTGCGATCGCAGACC
Internal bar code:AGTCTGCGATTGGATCCCTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:370
LEAP-Seq percent confirming:67.6471
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTAGAGGTGTGTGTGGGG
Suggested primer 2:GCGCACTCGATACCCATACA