Insertion junction: CLIP2.001689_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001689
Chromosome:chromosome 12
Location:5546186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530750 (1 of 239) IPR016024 - Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGCTAGCCAAGGTGAGAGGCAGTGTCAGCCCTCGTGACGGCAGGGAA
Internal bar code:AAGTCACAACCAGGGATTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2058
LEAP-Seq percent confirming:56.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAAAGGACATGGTGGGG
Suggested primer 2:TTCAGTAATTTCGCCCGGCT