Insertion junction: CLIP2.001691_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001691
Chromosome:chromosome 10
Location:2891161
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g439700 CGL28 conserved expressed putative RNA binding protein; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCGTGCTCAAGCCCCACACAGGCTGACAAGGCCCGATAACACTCGAC
Internal bar code:AGACAGACGTTTGCCTCTACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:366
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGGGCATGACTCCTCT
Suggested primer 2:TACCCTACCCCTAACCTGCC