Insertion junction: CLIP2.001697_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001697
Chromosome:chromosome 3
Location:8834135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206369 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCAGCGACGGCGGTCGTGGTGTAGGCGCTGCGCGGCGATTATGTTCA
Internal bar code:GCACTTGGAGCTATAATCGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1630
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGTGAAGGTACTGCGAG
Suggested primer 2:GTGTGTAGACAGCGGTGGAA