Insertion junction: CLIP2.001705_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001705
Chromosome:chromosome 16
Location:257998
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694400 TGD2,CGL57 Trigalactosyldiacylglycerol 2; (1 of 2) PF02470 - MlaD protein (MlaD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCTTGTGAATGACCCCTTCCCCCTTCTGCAGGTGCCTGTGCCCGATT
Internal bar code:CAGCACGGTTAGGCGACCCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:864
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGGGGTGTGTGTGTA
Suggested primer 2:CCAACCAGTCCGGACTCATC