Insertion junction: CLIP2.001705_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001705
Chromosome:chromosome 16
Location:258009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694400 TGD2,CGL57 Trigalactosyldiacylglycerol 2; (1 of 2) PF02470 - MlaD protein (MlaD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGTAGACGTGAAGTGTGGGGATTGTTCAGCCCAATCCCAACAAGTGG
Internal bar code:CAGCACGGTTAGGCGACCCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:323
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCAGTCCGGACTCATC
Suggested primer 2:GTGTGTGGGGTGTGTGTGTA