Insertion junction: CLIP2.001717_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001717
Chromosome:chromosome 3
Location:6294562
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191950 CGLD31 (1 of 1) PF01782 - RimM N-terminal domain (RimM); RimM-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCGCAGAAGCTGCAGGAGCTGCGTGAGCAGCTGCAGAAGGAGGAGGA
Internal bar code:ATTAAAACGGTATATTTTGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1934
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTTGCGTATGCTAGTGC
Suggested primer 2:AGACATCATGAACAGCCGCA