Insertion junction: CLIP2.001722_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001722
Chromosome:chromosome 17
Location:659780
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g700300 CGL22 cdc48-like protein; (1 of 3) PF00004//PF07724 - ATPase family associated with various cellular activities (AAA) (AAA) // AAA domain (Cdc48 subfamily) (AAA_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACACCACCCACCACTGCTACCCCGCTACATCACTGCCCCCCACAG
Internal bar code:CTCGTCGTGCAGTGGTACGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:838
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCATTGCGAAGTCTGCCA
Suggested primer 2:AGATGGATGGCATCGAGCTG