Insertion junction: CLIP2.001724_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001724
Chromosome:chromosome 15
Location:1624438
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre19.g750597 CDPK2 Calcium/calmodulin-dependent protein kinase; (1 of 2) PF00069//PF13499 - Protein kinase domain (Pkinase) // EF-hand domain pair (EF-hand_7) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTTGGTACTGCAGTGTAAAATGTCGGTTTAGGAGTGCCTTTGATGGAG
Internal bar code:GTTGAATACCGCATATGTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2476
LEAP-Seq percent confirming:98.2456
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGACAACCCGATCGTGTC
Suggested primer 2:CCAACACCCCACCTGTCTAC