Insertion junction: CLIP2.001727_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001727
Chromosome:chromosome 6
Location:2515379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269300 CGL120 (1 of 1) PF07103 - Protein of unknown function (DUF1365) (DUF1365); Conserved in the Green Lineage 120 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCCGCAAACCGCCATGACTCGTTGACGCCAGCTTCGCCGGCGTCACC
Internal bar code:TGAATGGGCAATATGTAAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1510
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCATTCGATTAGGGCTCC
Suggested primer 2:ATGTGTGTGGTGTGTGGTGT