Insertion junction: CLIP2.001728_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001728
Chromosome:chromosome 16
Location:3074624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664350 CLD1 (1 of 1) PTHR10992//PTHR10992:SF752 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // ALPHA/BETA-HYDROLASE-LIKE PROTEIN; Putative Chlorophyll dephytylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCCCCACATCACACACTCCGGGTCCCATACCGCCGACACCCTCCGGC
Internal bar code:CCAAAAATGGCCTGGATAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1038
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCTCTTTCTGCGTGGGT
Suggested primer 2:GTGTATGCGATGCAGGCTTG