Insertion junction: CLIP2.001748_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001748
Chromosome:chromosome 1
Location:5348747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g037700 FAD3,FAD9,delta4FAD (1 of 2) PTHR19353//PTHR19353:SF30 - FATTY ACID DESATURASE 2 // FATTY ACID DESATURASE 2; Delta4-fatty acid desaturase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCGCAATGGCAGGCGCTCAGGCCATCGGGTCATCCCTTGGGTCATCC
Internal bar code:CAAGAGAGGGTTCTCAGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3015
LEAP-Seq percent confirming:82.0225
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTGATGGCGAGTCTGCT
Suggested primer 2:GGTATGTCCTCGAGAGCTGC