Insertion junction: CLIP2.001752_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001752
Chromosome:chromosome 14
Location:938464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613450 CGL87 (1 of 1) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAATGTCCCCGTATATTTGTGCTGCGGGCCTTTCGCTTGCCTTCTCA
Internal bar code:CGGGGAAGCTACAGCGACACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2095
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCACCACCACCATCACC
Suggested primer 2:CAGGCATAGCGTTTCATGGC